From 70e1ba82a4ae5f639e26365e868e3e1888934be8 Mon Sep 17 00:00:00 2001
From: borrageiros <adrian.borrageiros@netexlearning.com>
Date: Mon, 8 Jul 2024 17:03:14 +0200
Subject: [PATCH] SAVE

---
 change_quality.py | 16 ++++++++--------
 1 file changed, 8 insertions(+), 8 deletions(-)

diff --git a/change_quality.py b/change_quality.py
index 15562d8..1b5e3da 100644
--- a/change_quality.py
+++ b/change_quality.py
@@ -6,16 +6,16 @@ import os
 
 ### FORWARD
 def generate_quality_first_bases_fw(read_length):
-    return ''.join(random.choice('?@ABCD') for _ in range(int(read_length * 0.02)))
+    return ''.join(random.choice('?@ABCD') for _ in range(int(read_length * 0.01)))
 
 def generate_quality_next_bases_fw(read_length):
-    return ''.join(random.choice('ABCDEG') for _ in range(int(read_length * 0.02)))
+    return ''.join(random.choice('ABCDEG') for _ in range(int(read_length * 0.01)))
 
 def generate_quality_middle_bases_fw(read_length):
-    return ''.join(random.choice('FGH') for _ in range(int(read_length * 0.10)))
+    return ''.join(random.choice('FGH') for _ in range(int(read_length * 0.05)))
 
 def generate_quality_last_bases_fw(read_length):
-    return ''.join(random.choice('HI') for _ in range((int(read_length * 0.60))))
+    return ''.join(random.choice('HI') for _ in range((int(read_length * 0.70))))
 
 def generate_quality_decreasing_200_220_fw(read_length):
     return ''.join(random.choice('CDEFGH') for _ in range(int(read_length * 0.10)))
@@ -24,10 +24,10 @@ def generate_quality_decreasing_220_260_fw(read_length):
     return ''.join(random.choice('ABCDEG') for _ in range(int(read_length * 0.10)))
 
 def generate_quality_decreasing_260_290_fw(read_length):
-    return ''.join(random.choice('?@ABCD') for _ in range(int(read_length * 0.04)))
+    return ''.join(random.choice('?@ABCD') for _ in range(int(read_length * 0.02)))
 
 def generate_quality_decreasing_290_300_fw(read_length):
-    return ''.join(random.choice('?@AB') for _ in range(int(read_length * 0.02)))
+    return ''.join(random.choice('?@AB') for _ in range(int(read_length * 0.01)))
 
 def change_quality_fw(input_file, output_file):
     with open(input_file, 'r') as f_in, open(output_file, 'w') as f_out:
@@ -58,7 +58,7 @@ def generate_quality_first_bases_rv(read_length):
     return ''.join(random.choice('?@ABCD') for _ in range(int(read_length * 0.01)))
 
 def generate_quality_next_bases_rv(read_length):
-    return ''.join(random.choice('ABCDEG') for _ in range(int(read_length * 0.02)))
+    return ''.join(random.choice('ABCDEG') for _ in range(int(read_length * 0.01)))
 
 def generate_quality_middle_bases_rv(read_length):
     return ''.join(random.choice('EFGH') for _ in range(int(read_length * 0.02)))
@@ -79,7 +79,7 @@ def generate_quality_decreasing_260_290_rv(read_length):
     return ''.join(random.choice('?@ABC') for _ in range(int(read_length * 0.04)))
 
 def generate_quality_decreasing_290_300_rv(read_length):
-    return ''.join(random.choice('?@AB') for _ in range(int(read_length * 0.01)))
+    return ''.join(random.choice('?@AB') for _ in range(int(read_length * 0.02)))
 
 def change_quality_rv(input_file, output_file):
     with open(input_file, 'r') as f_in, open(output_file, 'w') as f_out: